Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm4290-201ENSMUST00000206897 814 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm45422-201ENSMUST00000211476 246 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm37940-201ENSMUST00000194243 3251 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm24350-201ENSMUST00000104163 133 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm15670-201ENSMUST00000117740 447 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm6062-201ENSMUST00000120462 631 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm16345-201ENSMUST00000146065 158 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm22870-201ENSMUST00000157501 112 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Mir1947-201ENSMUST00000158235 85 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm17952-201ENSMUST00000193914 747 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 AC153729.1-201ENSMUST00000214055 2562 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm6620-201ENSMUST00000120113 715 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Gm29072-201ENSMUST00000191149 678 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.72□□□□□ -1.49
Col4a6B1AVK5 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Col4a6B1AVK5 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Col4a6B1AVK5 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.71□□□□□ -1.49
Col4a6B1AVK5 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.71□□□□□ -1.49
Col4a6B1AVK5 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.71□□□□□ -1.49
Col4a6B1AVK5 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm23631-201ENSMUST00000175291 123 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm19898-201ENSMUST00000177490 251 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm27875-201ENSMUST00000184425 123 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm19029-201ENSMUST00000189923 564 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm9173-201ENSMUST00000198054 400 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm19936-201ENSMUST00000216414 838 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm46191-201ENSMUST00000218899 433 ntBASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col4a6B1AVK5 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms