Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm8401-201ENSMUST00000120248 1739 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm44660-201ENSMUST00000207134 2465 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm45528-201ENSMUST00000209854 3145 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm8853-201ENSMUST00000198366 1344 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm18632-201ENSMUST00000222597 2087 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm5387-201ENSMUST00000119776 857 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm25389-201ENSMUST00000157340 286 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm28567-201ENSMUST00000190270 693 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm37044-201ENSMUST00000193531 693 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm38369-201ENSMUST00000195101 693 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm43524-201ENSMUST00000197278 298 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm20586-201ENSMUST00000210122 547 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm37057-201ENSMUST00000192624 1916 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm37926-201ENSMUST00000191922 2424 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm24160-201ENSMUST00000104594 126 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm13679-201ENSMUST00000118678 484 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm12988-201ENSMUST00000119054 478 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm12422-201ENSMUST00000121431 302 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm13149-201ENSMUST00000122071 339 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm26318-201ENSMUST00000176507 96 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm34176-201ENSMUST00000192621 474 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm37685-201ENSMUST00000193507 2177 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm42531-201ENSMUST00000201648 4048 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 AC154734.1-201ENSMUST00000219957 2141 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm29474-201ENSMUST00000187688 379 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm19880-201ENSMUST00000207731 318 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm2607-201ENSMUST00000212389 627 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Gm42549-201ENSMUST00000202392 7004 ntBASIC4.67□□□□□ -1.66
Col6a4A2AX52 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col6a4A2AX52 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm24578-201ENSMUST00000103970 129 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms