Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Lipe-203ENSMUST00000105177 1251 ntBASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Gm11270-201ENSMUST00000117685 471 ntBASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Gm17149-201ENSMUST00000164712 375 ntBASIC6.15□□□□□ -1.43
Scn3aA2ASI5 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Gm2367-201ENSMUST00000192374 472 ntBASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scn3aA2ASI5 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Gm10784-201ENSMUST00000178715 238 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Gm21654-201ENSMUST00000188086 691 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Gm38185-201ENSMUST00000193195 694 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn3aA2ASI5 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm11561-201ENSMUST00000117429 417 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm13007-201ENSMUST00000121866 365 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm25389-201ENSMUST00000157340 286 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm23537-201ENSMUST00000157536 330 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Mir7006-201ENSMUST00000183624 69 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm37882-201ENSMUST00000195254 196 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Mir409-201ENSMUST00000198153 79 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 AC164597.1-201ENSMUST00000226538 514 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm18924-201ENSMUST00000211929 316 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Mir342-201ENSMUST00000083502 99 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn3aA2ASI5 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms