Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.38□□□□□ -1.55
H2afb3S4R1G7 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm13811-201ENSMUST00000117800 256 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm14863-201ENSMUST00000119648 307 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm12308-201ENSMUST00000120440 389 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm12005-201ENSMUST00000121451 379 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm13440-201ENSMUST00000121665 496 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm25281-201ENSMUST00000157270 104 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm24081-201ENSMUST00000175177 125 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm22111-201ENSMUST00000178010 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm23687-201ENSMUST00000178664 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm24566-201ENSMUST00000179286 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm23305-201ENSMUST00000179342 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm26389-201ENSMUST00000179819 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm22130-201ENSMUST00000179979 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm22393-201ENSMUST00000180153 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm25085-201ENSMUST00000180298 79 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm9556-201ENSMUST00000182938 940 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm27193-201ENSMUST00000184217 586 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm27817-201ENSMUST00000184302 233 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm5734-201ENSMUST00000189787 913 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm37358-201ENSMUST00000195492 479 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm29736-201ENSMUST00000198189 385 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm45608-201ENSMUST00000210948 389 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm18940-201ENSMUST00000222518 871 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm10095-201ENSMUST00000222765 483 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 AL837512.1-201ENSMUST00000223914 1073 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm7869-201ENSMUST00000121457 1322 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm3563-201ENSMUST00000172963 1628 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.37□□□□□ -1.55
H2afb3S4R1G7 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
H2afb3S4R1G7 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm25346-201ENSMUST00000104509 128 ntBASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm12988-201ENSMUST00000119054 478 ntBASIC5.36□□□□□ -1.55
H2afb3S4R1G7 Gm11445-201ENSMUST00000119101 532 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms