Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm14805-201ENSMUST00000120172 340 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm19560-201ENSMUST00000177510 514 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Mir6516-201ENSMUST00000196236 110 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm19900-201ENSMUST00000207285 576 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm31166-201ENSMUST00000209326 288 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm3912-203ENSMUST00000211024 367 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm7042-201ENSMUST00000223027 384 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Snord59a-201ENSMUST00000082844 74 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lima1Q9ERG0 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm16423-201ENSMUST00000120078 947 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm11852-201ENSMUST00000120806 222 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm12833-201ENSMUST00000136112 477 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm26069-201ENSMUST00000157497 277 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm22599-201ENSMUST00000157597 132 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm22655-201ENSMUST00000174949 96 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Mir5125-201ENSMUST00000175240 79 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm23872-201ENSMUST00000175432 77 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm22932-201ENSMUST00000175510 72 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm18953-201ENSMUST00000175694 300 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm24303-201ENSMUST00000178237 126 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm27781-201ENSMUST00000185185 92 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm6074-201ENSMUST00000193340 451 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm42646-201ENSMUST00000202233 914 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm44239-201ENSMUST00000204228 271 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm7990-201ENSMUST00000212126 593 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.43□□□□□ -1.54
Lima1Q9ERG0 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.43□□□□□ -1.54
Lima1Q9ERG0 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms