Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm16423-201ENSMUST00000120078 947 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm13430-201ENSMUST00000121366 288 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm26372-201ENSMUST00000157831 236 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm22650-201ENSMUST00000175138 105 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm27409-201ENSMUST00000184727 80 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm38015-201ENSMUST00000193048 188 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm42652-201ENSMUST00000199073 614 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm26078-201ENSMUST00000104067 128 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm13890-201ENSMUST00000117578 390 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm3943-201ENSMUST00000118606 718 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm13593-201ENSMUST00000121329 692 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm12936-201ENSMUST00000121439 301 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm8061-201ENSMUST00000122380 350 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm29159-201ENSMUST00000187969 379 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm29592-201ENSMUST00000189434 370 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm19231-201ENSMUST00000193212 830 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm37235-201ENSMUST00000195171 59 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm44432-201ENSMUST00000203342 938 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Cdc40Q9DC48 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm22499-201ENSMUST00000104501 135 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm15400-201ENSMUST00000118944 601 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm15660-201ENSMUST00000118997 478 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm25489-201ENSMUST00000158727 141 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm2959-201ENSMUST00000169844 621 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms