Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ddx56Q9D0R4 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
Ddx56Q9D0R4 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC6.46□□□□□ -1.37
Ddx56Q9D0R4 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Ddx56Q9D0R4 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm13080-201ENSMUST00000120556 420 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm14122-201ENSMUST00000122076 973 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm23387-201ENSMUST00000158586 107 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm22693-201ENSMUST00000175049 442 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm5260-201ENSMUST00000186157 949 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm29551-201ENSMUST00000190913 698 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm43048-201ENSMUST00000196101 388 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm44857-201ENSMUST00000208331 196 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm45189-201ENSMUST00000208567 363 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm9237-201ENSMUST00000221499 548 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm8724-201ENSMUST00000081668 483 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm23975-201ENSMUST00000082685 106 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm24032-201ENSMUST00000083932 159 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm43826-201ENSMUST00000199604 2612 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.46□□□□□ -1.38
Ddx56Q9D0R4 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm24069-201ENSMUST00000104512 127 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm11271-201ENSMUST00000116054 440 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm5383-201ENSMUST00000121177 617 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm14515-201ENSMUST00000121327 216 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm12438-201ENSMUST00000122034 336 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm8367-201ENSMUST00000186145 887 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm29385-201ENSMUST00000186831 363 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC6.45□□□□□ -1.38
Ddx56Q9D0R4 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms