Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cstf3Q99LI7 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cstf3Q99LI7 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cstf3Q99LI7 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm13114-201ENSMUST00000117605 106 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm14115-201ENSMUST00000119242 482 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm11227-201ENSMUST00000119774 471 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm13991-201ENSMUST00000120190 648 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm14679-201ENSMUST00000121536 722 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm11910-201ENSMUST00000121624 432 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm12293-201ENSMUST00000121898 590 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm15970-201ENSMUST00000160623 834 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm22650-201ENSMUST00000175138 105 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm18953-201ENSMUST00000175694 300 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm18348-201ENSMUST00000191227 820 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm2367-201ENSMUST00000192374 472 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm9038-201ENSMUST00000203400 604 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm19033-201ENSMUST00000208516 964 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm45157-201ENSMUST00000208729 401 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cstf3Q99LI7 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.59□□□□□ -1.52
Cstf3Q99LI7 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
Cstf3Q99LI7 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Cstf3Q99LI7 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cstf3Q99LI7 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.59□□□□□ -1.52
Cstf3Q99LI7 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm23311-201ENSMUST00000104152 134 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm22499-201ENSMUST00000104501 135 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Mir1900-201ENSMUST00000122714 78 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm25826-201ENSMUST00000157090 137 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm17511-201ENSMUST00000172206 342 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm27044-201ENSMUST00000183033 796 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm29519-201ENSMUST00000186994 398 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm4322-201ENSMUST00000191094 336 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm9057-201ENSMUST00000198791 296 ntBASIC5.58□□□□□ -1.52
Cstf3Q99LI7 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms