Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Clrn1Q8K445 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Clrn1Q8K445 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm26289-201ENSMUST00000104169 131 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm11256-201ENSMUST00000118109 829 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm12985-201ENSMUST00000118376 183 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm13902-201ENSMUST00000120168 605 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm14898-201ENSMUST00000120202 645 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm14939-201ENSMUST00000120347 680 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Clrn1Q8K445 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm26486-201ENSMUST00000158021 110 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm25374-201ENSMUST00000158158 101 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm3221-201ENSMUST00000164869 440 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm24812-201ENSMUST00000175315 284 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm27942-201ENSMUST00000184669 101 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm9127-201ENSMUST00000188041 985 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm43048-201ENSMUST00000196101 388 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm5050-201ENSMUST00000197164 775 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm44075-201ENSMUST00000204208 216 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm44163-201ENSMUST00000205140 475 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm18387-201ENSMUST00000220333 702 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.9□□□□□ -1.46
Clrn1Q8K445 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Clrn1Q8K445 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.9□□□□□ -1.47
Clrn1Q8K445 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.9□□□□□ -1.47
Clrn1Q8K445 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Clrn1Q8K445 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC5.9□□□□□ -1.47
Clrn1Q8K445 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
Clrn1Q8K445 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm13768-201ENSMUST00000116469 929 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm5943-201ENSMUST00000119458 459 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm15181-201ENSMUST00000120142 177 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm6977-201ENSMUST00000121568 512 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm24359-201ENSMUST00000158418 221 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm25904-201ENSMUST00000158491 143 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm16236-201ENSMUST00000159588 379 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms