Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Gm5830-201ENSMUST00000049117 443 ntBASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc28bQ8CEG5 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm12303-201ENSMUST00000119506 673 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm12293-201ENSMUST00000121898 590 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26069-201ENSMUST00000157497 277 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm24741-201ENSMUST00000158857 106 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6872-201ENSMUST00000165001 700 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm4152-201ENSMUST00000172675 259 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm20690-201ENSMUST00000177341 315 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm42579-201ENSMUST00000200512 734 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6520-201ENSMUST00000200636 410 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm19182-201ENSMUST00000207139 577 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm45422-201ENSMUST00000211476 246 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm45724-201ENSMUST00000213031 420 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm46311-201ENSMUST00000217971 203 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6906-201ENSMUST00000218014 569 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm7887-201ENSMUST00000056948 537 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23302-201ENSMUST00000082710 100 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc28bQ8CEG5 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm45177-201ENSMUST00000209104 2307 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm12643-201ENSMUST00000116078 374 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm15660-201ENSMUST00000118997 478 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm24402-201ENSMUST00000157873 91 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm16566-201ENSMUST00000160387 910 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23872-201ENSMUST00000175432 77 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26923-201ENSMUST00000182615 996 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Mir7222-201ENSMUST00000183740 75 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Vis1-201ENSMUST00000183957 201 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm28186-201ENSMUST00000187447 679 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm28918-201ENSMUST00000188822 699 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm38237-201ENSMUST00000193366 376 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm42646-201ENSMUST00000202233 914 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm44856-201ENSMUST00000206639 304 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm45072-201ENSMUST00000208673 929 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm7990-201ENSMUST00000212126 593 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms