Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm11105-201ENSMUST00000112781 478 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm11617-201ENSMUST00000119609 639 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm13506-201ENSMUST00000120391 1083 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm25047-201ENSMUST00000122667 104 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm6808-201ENSMUST00000162341 807 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm21772-201ENSMUST00000169213 478 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm17126-201ENSMUST00000172276 523 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm20480-201ENSMUST00000173953 250 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm29288-201ENSMUST00000191582 901 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm2429-201ENSMUST00000194635 586 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm16335-201ENSMUST00000077495 309 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Mir375-201ENSMUST00000083682 64 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.8□□□□□ -1.32
Vps53Q8CCB4 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC131068.3-201ENSMUST00000228438 1456 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm15933-201ENSMUST00000117215 616 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm8501-201ENSMUST00000117684 432 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm15840-201ENSMUST00000122099 943 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Mir5112-201ENSMUST00000174897 60 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm4845-201ENSMUST00000179202 562 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm28883-201ENSMUST00000189256 369 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm44382-201ENSMUST00000198683 122 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm5655-201ENSMUST00000221078 901 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm11360-201ENSMUST00000221898 262 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC118006.2-201ENSMUST00000224167 962 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC117949.2-201ENSMUST00000225900 584 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Naip3-201ENSMUST00000118082 4208 ntBASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Vps53Q8CCB4 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Vps53Q8CCB4 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Vps53Q8CCB4 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Vps53Q8CCB4 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.78□□□□□ -1.32
Vps53Q8CCB4 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.78□□□□□ -1.32
Vps53Q8CCB4 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Vps53Q8CCB4 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms