Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Rhoh-202ENSMUST00000201533 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Sp100-202ENSMUST00000066427 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Mir541-201ENSMUST00000102097 90 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Mir501-201ENSMUST00000102296 109 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 AY761185-201ENSMUST00000110758 448 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm15844-201ENSMUST00000118016 576 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm11371-201ENSMUST00000120294 385 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm15387-201ENSMUST00000120421 648 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm25834-201ENSMUST00000158916 101 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm25956-201ENSMUST00000175115 217 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Mir7655-201ENSMUST00000183376 58 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm17828-201ENSMUST00000183380 799 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm8354-201ENSMUST00000189223 1373 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm37624-201ENSMUST00000193751 219 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm37749-201ENSMUST00000193917 1899 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm45173-201ENSMUST00000206819 305 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm6063-201ENSMUST00000206958 485 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm45539-201ENSMUST00000210313 428 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Ddo-205ENSMUST00000214102 792 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm33700-201ENSMUST00000215123 697 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 AC147615.2-201ENSMUST00000219876 2154 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 AC109172.1-201ENSMUST00000227503 187 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Dnttip2-201ENSMUST00000035776 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Igsf1-202ENSMUST00000072037 2515 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 Mir187-201ENSMUST00000083598 61 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm5518-201ENSMUST00000084171 648 ntBASIC8.67□□□□□ -1.02
Trim35Q8C006 Olfr549-201ENSMUST00000098227 951 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim35Q8C006 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim35Q8C006 AC158605.3-201ENSMUST00000218999 2538 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm15577-201ENSMUST00000144350 2293 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm37139-201ENSMUST00000192134 4419 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm44894-201ENSMUST00000205280 2174 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm37760-201ENSMUST00000194726 3841 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Pus10-202ENSMUST00000058163 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Enox2-205ENSMUST00000114918 3226 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm43180-201ENSMUST00000197541 2886 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm22900-201ENSMUST00000104538 130 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm13733-201ENSMUST00000117290 535 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm12038-201ENSMUST00000117322 207 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm11409-201ENSMUST00000118621 403 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm5389-201ENSMUST00000120893 1176 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm11582-201ENSMUST00000121041 236 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm5644-201ENSMUST00000122039 465 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 n-R5s23-201ENSMUST00000122523 115 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm25783-201ENSMUST00000122525 190 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm24383-201ENSMUST00000122691 333 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm14562-201ENSMUST00000129885 543 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms