Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm23910-201ENSMUST00000104597 132 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm11826-201ENSMUST00000118781 438 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm16200-201ENSMUST00000120385 331 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm14620-201ENSMUST00000120656 383 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm13259-201ENSMUST00000120792 456 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm15275-201ENSMUST00000154752 347 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm22916-201ENSMUST00000157616 119 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm3216-201ENSMUST00000166927 486 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm3141-201ENSMUST00000168726 499 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm8039-201ENSMUST00000204758 712 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm6850-201ENSMUST00000210031 530 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm9202-201ENSMUST00000223036 437 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.74□□□□□ -1.49
Nup54Q8BTS4 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm14220-201ENSMUST00000118114 449 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm12303-201ENSMUST00000119506 673 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Mir1970-201ENSMUST00000157839 104 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm26970-201ENSMUST00000182990 964 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm27409-201ENSMUST00000184727 80 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm29376-201ENSMUST00000189357 835 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm8826-201ENSMUST00000193161 948 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm18553-201ENSMUST00000194152 634 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm45343-201ENSMUST00000210452 828 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm18329-201ENSMUST00000215832 589 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms