Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm23294-201ENSMUST00000104150 164 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Mir466j-201ENSMUST00000116876 122 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm11561-201ENSMUST00000117429 417 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm11447-201ENSMUST00000118983 858 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm7079-201ENSMUST00000119726 171 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm11848-201ENSMUST00000121207 973 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm23995-201ENSMUST00000158060 129 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm8032-201ENSMUST00000171009 574 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm2539-203ENSMUST00000181352 746 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm4832-201ENSMUST00000182679 399 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm27855-201ENSMUST00000184122 128 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm37336-202ENSMUST00000193705 468 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm42516-201ENSMUST00000198691 767 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm43215-201ENSMUST00000199108 252 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm44845-201ENSMUST00000208773 335 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC131743.3-201ENSMUST00000222099 662 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm22971-201ENSMUST00000083305 97 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm13428-201ENSMUST00000117540 365 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm6427-201ENSMUST00000118721 979 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm12850-201ENSMUST00000119210 436 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm14115-201ENSMUST00000119242 482 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm24767-201ENSMUST00000158509 95 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm18199-201ENSMUST00000173820 835 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm37203-201ENSMUST00000191618 385 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm44387-201ENSMUST00000196298 145 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm6590-201ENSMUST00000203343 687 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm45405-201ENSMUST00000211544 609 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm46191-201ENSMUST00000218899 433 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms