Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm37786-201ENSMUST00000191714 3225 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm8475-201ENSMUST00000118211 526 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm6893-201ENSMUST00000118385 522 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm14655-201ENSMUST00000120124 578 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm12543-201ENSMUST00000120410 543 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm16100-201ENSMUST00000120489 231 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm14980-201ENSMUST00000121247 736 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm14761-201ENSMUST00000121363 262 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 BC002163-201ENSMUST00000121906 319 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm14364-201ENSMUST00000129209 267 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm25277-201ENSMUST00000157266 324 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm25363-201ENSMUST00000158850 245 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm16566-201ENSMUST00000160387 910 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm6428-201ENSMUST00000161062 345 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm25690-201ENSMUST00000175439 77 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm15251-201ENSMUST00000177947 883 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm25671-201ENSMUST00000178612 105 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm23307-201ENSMUST00000179167 105 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm25286-201ENSMUST00000179790 105 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Mir6999-201ENSMUST00000183498 61 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm27402-201ENSMUST00000183890 120 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm28995-201ENSMUST00000186625 261 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm17835-201ENSMUST00000196870 499 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm44870-201ENSMUST00000207291 357 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm45725-201ENSMUST00000212962 337 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm8785-201ENSMUST00000220259 487 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm19154-201ENSMUST00000223330 940 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 AC154227.2-201ENSMUST00000228677 2101 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Foxc1Q61572 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm4017-201ENSMUST00000084813 338 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Synpo2-201ENSMUST00000051443 3719 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Foxc1Q61572 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Foxc1Q61572 Gm45537-201ENSMUST00000211539 2708 ntBASIC5.76□□□□□ -1.49
Foxc1Q61572 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Cblb-205ENSMUST00000227756 3378 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm6819-201ENSMUST00000185325 1891 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm37206-201ENSMUST00000195512 3069 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC5.75□□□□□ -1.49
Foxc1Q61572 Mir688-201ENSMUST00000102055 75 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm25167-201ENSMUST00000104188 120 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm22021-201ENSMUST00000104353 107 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Gm25563-201ENSMUST00000104603 74 ntBASIC5.75□□□□□ -1.49
Foxc1Q61572 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Foxc1Q61572 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms