Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm16200-201ENSMUST00000120385 331 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm11679-201ENSMUST00000121830 779 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm7266-201ENSMUST00000187999 405 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm36939-201ENSMUST00000194889 439 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm6477-201ENSMUST00000217098 764 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Upf3bQ3ULL6 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm11826-201ENSMUST00000118781 438 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm14620-201ENSMUST00000120656 383 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm25489-201ENSMUST00000158727 141 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm1972-201ENSMUST00000181606 964 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm38015-201ENSMUST00000193048 188 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm37187-201ENSMUST00000193425 341 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm37336-202ENSMUST00000193705 468 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm18553-201ENSMUST00000194152 634 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm42522-201ENSMUST00000196071 255 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm43078-201ENSMUST00000197222 168 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Mir6906-201ENSMUST00000198998 58 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm6520-201ENSMUST00000200636 410 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 LOC665443-201ENSMUST00000212284 796 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm19186-201ENSMUST00000219922 333 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm19195-201ENSMUST00000222018 511 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Upf3bQ3ULL6 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm13245-201ENSMUST00000119646 260 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm13363-201ENSMUST00000122008 522 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Mir1903-201ENSMUST00000122574 80 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms