Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.81□□□□□ -1
Col17a1Q07563 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Col17a1Q07563 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 AC137842.3-201ENSMUST00000228855 2397 ntBASIC8.8□□□□□ -1
Col17a1Q07563 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Col17a1Q07563 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 AC159006.2-201ENSMUST00000228734 4144 ntBASIC8.8□□□□□ -1
Col17a1Q07563 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Gm14125-202ENSMUST00000120921 756 ntBASIC8.8□□□□□ -1
Col17a1Q07563 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 Gm24961-201ENSMUST00000157918 184 ntBASIC8.8□□□□□ -1
Col17a1Q07563 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC8.8□□□□□ -1
Col17a1Q07563 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Gm27754-201ENSMUST00000183340 126 ntBASIC8.8□□□□□ -1
Col17a1Q07563 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC8.8□□□□□ -1
Col17a1Q07563 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.8□□□□□ -1
Col17a1Q07563 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC8.8□□□□□ -1
Col17a1Q07563 AC132384.5-201ENSMUST00000218562 226 ntBASIC8.8□□□□□ -1
Col17a1Q07563 CT573086.3-201ENSMUST00000228762 594 ntBASIC8.8□□□□□ -1
Col17a1Q07563 AC159244.3-201ENSMUST00000222887 3153 ntBASIC8.8□□□□□ -1
Col17a1Q07563 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col17a1Q07563 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.8□□□□□ -1
Col17a1Q07563 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC8.8□□□□□ -1
Col17a1Q07563 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Col17a1Q07563 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col17a1Q07563 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col17a1Q07563 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.79□□□□□ -1
Col17a1Q07563 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col17a1Q07563 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col17a1Q07563 Gm25418-201ENSMUST00000104214 129 ntBASIC8.79□□□□□ -1
Col17a1Q07563 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC8.79□□□□□ -1
Col17a1Q07563 Gm5963-201ENSMUST00000143451 236 ntBASIC8.79□□□□□ -1
Col17a1Q07563 Gm28439-201ENSMUST00000187714 876 ntBASIC8.79□□□□□ -1
Col17a1Q07563 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col17a1Q07563 Gm9931-201ENSMUST00000193584 1185 ntBASIC8.79□□□□□ -1
Col17a1Q07563 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC8.79□□□□□ -1
Col17a1Q07563 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 AC153516.1-201ENSMUST00000217955 779 ntBASIC8.79□□□□□ -1
Col17a1Q07563 AC154245.1-201ENSMUST00000224615 601 ntBASIC8.79□□□□□ -1
Col17a1Q07563 CT025525.4-201ENSMUST00000227728 277 ntBASIC8.79□□□□□ -1
Col17a1Q07563 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col17a1Q07563 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col17a1Q07563 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col17a1Q07563 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col17a1Q07563 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.79□□□□□ -1
Col17a1Q07563 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Col17a1Q07563 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Col17a1Q07563 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col17a1Q07563 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col17a1Q07563 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Col17a1Q07563 Gm12656-201ENSMUST00000118149 577 ntBASIC8.78□□□□□ -1
Col17a1Q07563 Gm22725-201ENSMUST00000158092 110 ntBASIC8.78□□□□□ -1
Col17a1Q07563 Gm6155-201ENSMUST00000173735 341 ntBASIC8.78□□□□□ -1
Col17a1Q07563 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col17a1Q07563 Gm2914-201ENSMUST00000186120 328 ntBASIC8.78□□□□□ -1
Col17a1Q07563 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Col17a1Q07563 Gm37878-201ENSMUST00000192108 387 ntBASIC8.78□□□□□ -1
Col17a1Q07563 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC8.78□□□□□ -1
Col17a1Q07563 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col17a1Q07563 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC8.78□□□□□ -1
Col17a1Q07563 AC123064.1-201ENSMUST00000218950 406 ntBASIC8.78□□□□□ -1
Col17a1Q07563 AC173482.2-201ENSMUST00000224044 750 ntBASIC8.78□□□□□ -1
Col17a1Q07563 CT025689.2-201ENSMUST00000224979 429 ntBASIC8.78□□□□□ -1
Col17a1Q07563 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col17a1Q07563 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col17a1Q07563 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC8.78□□□□□ -1
Col17a1Q07563 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col17a1Q07563 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col17a1Q07563 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Col17a1Q07563 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col17a1Q07563 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms