Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm23238-201ENSMUST00000083007 164 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msx2Q03358 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm24473-201ENSMUST00000104483 131 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm22710-201ENSMUST00000116892 125 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm12447-201ENSMUST00000119110 470 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm11798-201ENSMUST00000119150 421 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm8421-201ENSMUST00000119439 305 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm11606-201ENSMUST00000120706 617 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm11385-201ENSMUST00000121513 570 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm24176-201ENSMUST00000158928 121 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm27970-201ENSMUST00000184854 407 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm27588-201ENSMUST00000185096 263 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm29650-201ENSMUST00000188485 742 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.28□□□□□ -1.4
Msx2Q03358 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm29369-201ENSMUST00000190674 615 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm37585-201ENSMUST00000195440 280 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm19185-201ENSMUST00000196365 643 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Msx2Q03358 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm19936-201ENSMUST00000216414 838 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm8125-201ENSMUST00000216602 738 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Msx2Q03358 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.28□□□□□ -1.4
Msx2Q03358 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm25587-201ENSMUST00000082498 166 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Rny3-201ENSMUST00000083011 102 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Msx2Q03358 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.28□□□□□ -1.4
Msx2Q03358 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.28□□□□□ -1.4
Msx2Q03358 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msx2Q03358 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms