Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CiitaP79621 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CiitaP79621 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Gm14220-201ENSMUST00000118114 449 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm12768-201ENSMUST00000120055 759 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm12222-201ENSMUST00000121368 260 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm6081-201ENSMUST00000134472 489 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm6542-201ENSMUST00000153606 772 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm26069-201ENSMUST00000157497 277 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm23279-201ENSMUST00000157912 97 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm25489-201ENSMUST00000158727 141 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm4845-201ENSMUST00000179202 562 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm27193-201ENSMUST00000184217 586 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm27409-201ENSMUST00000184727 80 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm42522-201ENSMUST00000196071 255 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm19039-201ENSMUST00000204363 575 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm45405-201ENSMUST00000211544 609 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm7990-201ENSMUST00000212126 593 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CiitaP79621 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CiitaP79621 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.22□□□□□ -1.41
CiitaP79621 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CiitaP79621 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.21□□□□□ -1.41
CiitaP79621 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
CiitaP79621 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.21□□□□□ -1.41
CiitaP79621 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.21□□□□□ -1.41
CiitaP79621 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CiitaP79621 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
CiitaP79621 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.21□□□□□ -1.42
CiitaP79621 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CiitaP79621 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CiitaP79621 Snord65-201ENSMUST00000104269 72 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm22499-201ENSMUST00000104501 135 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm7079-201ENSMUST00000119726 171 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm12322-201ENSMUST00000121605 389 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm12732-201ENSMUST00000121688 180 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Mir7235-201ENSMUST00000183796 56 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Mir7037-201ENSMUST00000184414 65 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm43743-202ENSMUST00000198353 491 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm42652-201ENSMUST00000199073 614 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm6520-201ENSMUST00000200636 410 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm44603-201ENSMUST00000206820 367 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm44623-201ENSMUST00000207934 434 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.21□□□□□ -1.42
CiitaP79621 AC110816.1-201ENSMUST00000218559 980 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Gm19186-201ENSMUST00000219922 333 ntBASIC6.21□□□□□ -1.42
CiitaP79621 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.21□□□□□ -1.42
CiitaP79621 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.21□□□□□ -1.42
CiitaP79621 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.21□□□□□ -1.42
CiitaP79621 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CiitaP79621 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CiitaP79621 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms