Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.12□□□□□ -1.43
NcanP55066 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NcanP55066 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.12□□□□□ -1.43
NcanP55066 Gm26238-201ENSMUST00000175538 117 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm28390-201ENSMUST00000185212 700 ntBASIC6.12□□□□□ -1.43
NcanP55066 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
NcanP55066 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC6.12□□□□□ -1.43
NcanP55066 Gm37293-201ENSMUST00000191658 295 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.12□□□□□ -1.43
NcanP55066 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Mir409-201ENSMUST00000198153 79 ntBASIC6.12□□□□□ -1.43
NcanP55066 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.12□□□□□ -1.43
NcanP55066 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NcanP55066 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NcanP55066 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NcanP55066 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm46191-201ENSMUST00000218899 433 ntBASIC6.12□□□□□ -1.43
NcanP55066 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.12□□□□□ -1.43
NcanP55066 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.12□□□□□ -1.43
NcanP55066 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Gm4963-201ENSMUST00000072718 378 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm4822-201ENSMUST00000077551 479 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm24405-201ENSMUST00000083033 167 ntBASIC6.12□□□□□ -1.43
NcanP55066 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
NcanP55066 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.12□□□□□ -1.43
NcanP55066 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
NcanP55066 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NcanP55066 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
NcanP55066 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
NcanP55066 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Gm8734-201ENSMUST00000211669 1312 ntBASIC6.11□□□□□ -1.43
NcanP55066 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Gm15152-201ENSMUST00000121540 394 ntBASIC6.11□□□□□ -1.43
NcanP55066 Gm25179-201ENSMUST00000122632 128 ntBASIC6.11□□□□□ -1.43
NcanP55066 Gm24359-201ENSMUST00000158418 221 ntBASIC6.11□□□□□ -1.43
NcanP55066 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Gm9687-201ENSMUST00000189312 602 ntBASIC6.11□□□□□ -1.43
NcanP55066 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.11□□□□□ -1.43
NcanP55066 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC6.11□□□□□ -1.43
NcanP55066 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.11□□□□□ -1.43
NcanP55066 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.11□□□□□ -1.43
NcanP55066 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.11□□□□□ -1.43
NcanP55066 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.11□□□□□ -1.43
NcanP55066 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Gm18591-201ENSMUST00000220568 763 ntBASIC6.11□□□□□ -1.43
NcanP55066 AC154358.1-201ENSMUST00000224871 218 ntBASIC6.11□□□□□ -1.43
NcanP55066 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NcanP55066 Gm23238-201ENSMUST00000083007 164 ntBASIC6.11□□□□□ -1.43
NcanP55066 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.11□□□□□ -1.43
NcanP55066 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.11□□□□□ -1.43
NcanP55066 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
NcanP55066 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.11□□□□□ -1.43
NcanP55066 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NcanP55066 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.11□□□□□ -1.43
NcanP55066 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.1□□□□□ -1.43
NcanP55066 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NcanP55066 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
NcanP55066 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 AC137842.3-201ENSMUST00000228855 2397 ntBASIC6.1□□□□□ -1.43
NcanP55066 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NcanP55066 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 182.8 ms