Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm12328-201ENSMUST00000118611 197 ntBASIC6.29□□□□□ -1.4
Brca1P48754 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC6.29□□□□□ -1.4
Brca1P48754 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.29□□□□□ -1.4
Brca1P48754 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm23972-201ENSMUST00000083322 165 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Gm22826-201ENSMUST00000083774 165 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Brca1P48754 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Brca1P48754 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Brca1P48754 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Gm15670-201ENSMUST00000117740 447 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Gm6620-201ENSMUST00000120113 715 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Gm11910-201ENSMUST00000121624 432 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Gm25293-201ENSMUST00000122792 285 ntBASIC6.28□□□□□ -1.4
Brca1P48754 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Mir1947-201ENSMUST00000158235 85 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 Gm10784-201ENSMUST00000178715 238 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Gm37882-201ENSMUST00000195254 196 ntBASIC6.28□□□□□ -1.4
Brca1P48754 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.28□□□□□ -1.4
Brca1P48754 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.28□□□□□ -1.4
Brca1P48754 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Brca1P48754 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Brca1P48754 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Brca1P48754 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Brca1P48754 Gm14769-201ENSMUST00000118590 432 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Gm25179-201ENSMUST00000122632 128 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Gm24628-201ENSMUST00000122761 289 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Gm23534-201ENSMUST00000157539 97 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Gm17121-201ENSMUST00000170414 847 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.27□□□□□ -1.41
Brca1P48754 Gm17222-201ENSMUST00000180135 847 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.27□□□□□ -1.41
Brca1P48754 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Gm42776-201ENSMUST00000198031 406 ntBASIC6.27□□□□□ -1.41
Brca1P48754 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.27□□□□□ -1.41
Brca1P48754 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.27□□□□□ -1.41
Brca1P48754 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Brca1P48754 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Brca1P48754 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.27□□□□□ -1.41
Brca1P48754 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Brca1P48754 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Brca1P48754 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Brca1P48754 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Brca1P48754 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Brca1P48754 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Brca1P48754 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.27□□□□□ -1.41
Brca1P48754 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Brca1P48754 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Brca1P48754 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms