Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.65□□□□□ -1.51
HttP42859 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HttP42859 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HttP42859 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HttP42859 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HttP42859 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.65□□□□□ -1.51
HttP42859 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HttP42859 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HttP42859 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.64□□□□□ -1.51
HttP42859 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.64□□□□□ -1.51
HttP42859 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
HttP42859 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.64□□□□□ -1.51
HttP42859 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HttP42859 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HttP42859 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.64□□□□□ -1.51
HttP42859 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
HttP42859 Gm24170-201ENSMUST00000104124 133 ntBASIC5.64□□□□□ -1.51
HttP42859 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HttP42859 Gm12423-201ENSMUST00000118334 135 ntBASIC5.64□□□□□ -1.51
HttP42859 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Gm26005-201ENSMUST00000158802 134 ntBASIC5.64□□□□□ -1.51
HttP42859 Gm6872-201ENSMUST00000165001 700 ntBASIC5.64□□□□□ -1.51
HttP42859 Gm6047-201ENSMUST00000167221 574 ntBASIC5.64□□□□□ -1.51
HttP42859 Gm5777-201ENSMUST00000177265 448 ntBASIC5.64□□□□□ -1.51
HttP42859 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.64□□□□□ -1.51
HttP42859 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.64□□□□□ -1.51
HttP42859 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.64□□□□□ -1.51
HttP42859 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HttP42859 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.64□□□□□ -1.51
HttP42859 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
HttP42859 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HttP42859 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.64□□□□□ -1.51
HttP42859 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.64□□□□□ -1.51
HttP42859 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HttP42859 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HttP42859 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.63□□□□□ -1.51
HttP42859 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.63□□□□□ -1.51
HttP42859 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm10552-201ENSMUST00000113396 372 ntBASIC5.63□□□□□ -1.51
HttP42859 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm37503-201ENSMUST00000192088 319 ntBASIC5.63□□□□□ -1.51
HttP42859 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.63□□□□□ -1.51
HttP42859 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.63□□□□□ -1.51
HttP42859 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
HttP42859 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.63□□□□□ -1.51
HttP42859 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HttP42859 Gm24186-201ENSMUST00000157983 127 ntBASIC5.63□□□□□ -1.51
HttP42859 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.63□□□□□ -1.51
HttP42859 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.63□□□□□ -1.51
HttP42859 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.63□□□□□ -1.51
HttP42859 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HttP42859 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HttP42859 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HttP42859 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm12007-201ENSMUST00000120978 597 ntBASIC5.63□□□□□ -1.51
HttP42859 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HttP42859 Gm26167-201ENSMUST00000158423 253 ntBASIC5.63□□□□□ -1.51
HttP42859 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.63□□□□□ -1.51
HttP42859 Gm3084-201ENSMUST00000169967 598 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms