Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Traf1P39428 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.69□□□□□ -1.34
Traf1P39428 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Traf1P39428 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Traf1P39428 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Traf1P39428 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.68□□□□□ -1.34
Traf1P39428 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
Traf1P39428 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Traf1P39428 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Traf1P39428 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Traf1P39428 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Traf1P39428 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm6461-201ENSMUST00000120015 633 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm13214-201ENSMUST00000122137 408 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm8988-201ENSMUST00000155015 1240 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm24236-201ENSMUST00000157794 134 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm8582-201ENSMUST00000164061 789 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Mir7020-201ENSMUST00000183787 70 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28943-201ENSMUST00000186187 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28736-201ENSMUST00000186257 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm29401-201ENSMUST00000186690 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm29178-204ENSMUST00000186784 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28589-201ENSMUST00000186991 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28936-201ENSMUST00000187153 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm29121-201ENSMUST00000187611 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28243-201ENSMUST00000187801 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28844-202ENSMUST00000187977 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.68□□□□□ -1.34
Traf1P39428 Gm29058-201ENSMUST00000189510 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm29624-201ENSMUST00000190018 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28780-201ENSMUST00000190223 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28969-211ENSMUST00000190992 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm28990-207ENSMUST00000191219 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm36468-201ENSMUST00000192119 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm31572-201ENSMUST00000193341 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm30175-201ENSMUST00000194173 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm30858-201ENSMUST00000195516 615 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm42652-201ENSMUST00000199073 614 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm44108-201ENSMUST00000203525 422 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.68□□□□□ -1.34
Traf1P39428 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.68□□□□□ -1.34
Traf1P39428 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.68□□□□□ -1.34
Traf1P39428 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.68□□□□□ -1.34
Traf1P39428 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Traf1P39428 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Traf1P39428 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Traf1P39428 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Traf1P39428 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Traf1P39428 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.68□□□□□ -1.34
Traf1P39428 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Traf1P39428 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Traf1P39428 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Traf1P39428 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Traf1P39428 Gm15421-202ENSMUST00000118224 399 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Gm11737-201ENSMUST00000118713 468 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Gm13489-201ENSMUST00000121234 971 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Traf1P39428 Gm23082-201ENSMUST00000157852 133 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Gm17711-201ENSMUST00000172028 237 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Gm18343-201ENSMUST00000172802 604 ntBASIC6.67□□□□□ -1.34
Traf1P39428 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Gm7733-201ENSMUST00000199038 919 ntBASIC6.67□□□□□ -1.34
Traf1P39428 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.67□□□□□ -1.34
Traf1P39428 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Gm31166-201ENSMUST00000209326 288 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.67□□□□□ -1.34
Traf1P39428 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.67□□□□□ -1.34
Traf1P39428 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.67□□□□□ -1.34
Traf1P39428 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.67□□□□□ -1.34
Traf1P39428 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.67□□□□□ -1.34
Traf1P39428 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.67□□□□□ -1.34
Traf1P39428 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.67□□□□□ -1.34
Traf1P39428 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Traf1P39428 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Traf1P39428 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms