Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm8853-201ENSMUST00000198366 1344 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm5925-201ENSMUST00000105016 1497 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm7416-201ENSMUST00000117448 1487 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col18a1P39061 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 AC156025.3-201ENSMUST00000225919 3095 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.7□□□□□ -1.18
Col18a1P39061 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.7□□□□□ -1.18
Col18a1P39061 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col18a1P39061 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm25564-201ENSMUST00000104604 132 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm16571-201ENSMUST00000159112 291 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm28356-202ENSMUST00000187566 858 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm21735-201ENSMUST00000190360 696 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm45215-201ENSMUST00000206407 395 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 AC123835.1-201ENSMUST00000214362 670 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Snord15b-201ENSMUST00000083032 145 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Olfr654-201ENSMUST00000098173 1155 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Col18a1P39061 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm14898-201ENSMUST00000120202 645 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm8256-201ENSMUST00000169178 453 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm27754-201ENSMUST00000183340 126 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC7.69□□□□□ -1.18
Col18a1P39061 Gm5735-201ENSMUST00000207053 167 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm17850-201ENSMUST00000210023 1154 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm46136-201ENSMUST00000214730 565 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC7.69□□□□□ -1.18
Col18a1P39061 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC7.69□□□□□ -1.18
Col18a1P39061 AC154738.2-201ENSMUST00000227403 1110 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm4963-201ENSMUST00000072718 378 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Gm25135-201ENSMUST00000082648 143 ntBASIC7.69□□□□□ -1.18
Col18a1P39061 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Col18a1P39061 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col18a1P39061 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Col18a1P39061 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col18a1P39061 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC7.68□□□□□ -1.18
Col18a1P39061 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Gm37205-201ENSMUST00000194820 2736 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 AC134860.3-201ENSMUST00000223564 1300 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 C78859-201ENSMUST00000212800 5943 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Mir678-201ENSMUST00000102114 84 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col18a1P39061 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC7.68□□□□□ -1.18
Col18a1P39061 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms