Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm22952-201ENSMUST00000116720 120 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm11902-201ENSMUST00000118849 270 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm14584-201ENSMUST00000118956 637 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm15967-201ENSMUST00000120027 1116 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm6142-201ENSMUST00000120290 325 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm15596-201ENSMUST00000121139 784 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm10157-201ENSMUST00000139408 343 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm23222-201ENSMUST00000158117 76 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm24767-201ENSMUST00000158509 95 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm23806-201ENSMUST00000175157 109 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Mir7222-201ENSMUST00000183740 75 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Mir8105-201ENSMUST00000184718 89 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm28527-201ENSMUST00000185210 297 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm18444-201ENSMUST00000191239 629 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm37996-201ENSMUST00000191859 367 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm43516-201ENSMUST00000196891 322 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm43222-201ENSMUST00000199013 603 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm4410-201ENSMUST00000199349 686 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm2287-202ENSMUST00000199619 1000 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm42663-201ENSMUST00000199883 351 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm42558-201ENSMUST00000200982 265 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm7554-201ENSMUST00000202282 574 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm44307-201ENSMUST00000204466 764 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC4.49□□□□□ -1.69
Sdc1P18828 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm20997-201ENSMUST00000205148 231 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 AC147782.1-201ENSMUST00000219169 475 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm8607-201ENSMUST00000221864 431 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 AC154323.2-201ENSMUST00000226557 1151 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 AC133958.1-201ENSMUST00000227085 961 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 CT030238.4-203ENSMUST00000227343 836 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 AC139197.1-201ENSMUST00000228332 813 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 AC163664.2-201ENSMUST00000228894 459 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Sdc1P18828 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Sdc1P18828 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.49□□□□□ -1.69
Sdc1P18828 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm5832-201ENSMUST00000121704 1582 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm25345-201ENSMUST00000104505 133 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm11799-201ENSMUST00000116110 460 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm13321-201ENSMUST00000117101 400 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm12306-201ENSMUST00000117256 171 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm11826-201ENSMUST00000118781 438 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm13988-201ENSMUST00000119363 288 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm7571-201ENSMUST00000120252 927 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Gm13787-201ENSMUST00000120422 168 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm15534-201ENSMUST00000137642 562 ntBASIC4.48□□□□□ -1.69
Sdc1P18828 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Sdc1P18828 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC4.48□□□□□ -1.69
Sdc1P18828 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms