Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm11908-201ENSMUST00000117755 347 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm27030-201ENSMUST00000182551 464 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm3605-201ENSMUST00000185858 440 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm28149-201ENSMUST00000187102 378 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm28768-201ENSMUST00000189034 378 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm37187-201ENSMUST00000193425 341 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm2429-201ENSMUST00000194635 586 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm43382-201ENSMUST00000198954 838 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm19880-201ENSMUST00000207731 318 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 LOC665443-201ENSMUST00000212284 796 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Chmp6P0C0A3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm12677-201ENSMUST00000118668 426 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm13473-201ENSMUST00000119289 367 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm14267-201ENSMUST00000119751 496 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm5405-201ENSMUST00000120478 609 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm25152-201ENSMUST00000157117 114 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm25363-201ENSMUST00000158850 245 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Scarna10-201ENSMUST00000158992 325 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm4832-201ENSMUST00000182679 399 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm8920-201ENSMUST00000196153 924 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm43456-201ENSMUST00000202519 457 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm45026-201ENSMUST00000205292 833 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm11360-201ENSMUST00000221898 262 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm19195-201ENSMUST00000222018 511 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.04□□□□□ -1.44
Chmp6P0C0A3 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 146.2 ms