Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a1P02463 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a1P02463 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a1P02463 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.69□□□□□ -1.34
Col4a1P02463 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col4a1P02463 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col4a1P02463 Gm7206-201ENSMUST00000117730 508 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm15187-201ENSMUST00000122329 264 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a1P02463 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a1P02463 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col4a1P02463 Mir7028-201ENSMUST00000185016 64 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm21654-201ENSMUST00000188086 691 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm38185-201ENSMUST00000193195 694 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a1P02463 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col4a1P02463 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a1P02463 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col4a1P02463 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col4a1P02463 Gm23948-201ENSMUST00000104030 132 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm6081-201ENSMUST00000134472 489 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a1P02463 Gm24217-201ENSMUST00000158260 133 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm8941-201ENSMUST00000181451 899 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a1P02463 Gm5946-201ENSMUST00000182340 970 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a1P02463 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.68□□□□□ -1.34
Col4a1P02463 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col4a1P02463 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a1P02463 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a1P02463 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Col4a1P02463 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.67□□□□□ -1.34
Col4a1P02463 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a1P02463 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Col4a1P02463 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a1P02463 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.67□□□□□ -1.34
Col4a1P02463 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.67□□□□□ -1.34
Col4a1P02463 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.67□□□□□ -1.34
Col4a1P02463 Gm42542-201ENSMUST00000197978 268 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 Gm44952-201ENSMUST00000204443 433 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 AC165260.4-201ENSMUST00000225924 724 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 Mir17-201ENSMUST00000083574 84 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a1P02463 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col4a1P02463 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Col4a1P02463 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.67□□□□□ -1.34
Col4a1P02463 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a1P02463 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Col4a1P02463 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col4a1P02463 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a1P02463 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col4a1P02463 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a1P02463 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Gm12854-201ENSMUST00000128518 297 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Gm26312-201ENSMUST00000157769 165 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.66□□□□□ -1.34
Col4a1P02463 Gm5285-201ENSMUST00000193089 666 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Gm7721-201ENSMUST00000200446 546 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col4a1P02463 Gm7665-201ENSMUST00000076710 297 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a1P02463 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col4a1P02463 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.66□□□□□ -1.34
Col4a1P02463 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Col4a1P02463 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
Col4a1P02463 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.66□□□□□ -1.34
Col4a1P02463 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a1P02463 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col4a1P02463 Gm22266-201ENSMUST00000104011 138 ntBASIC6.65□□□□□ -1.34
Col4a1P02463 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Col4a1P02463 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Col4a1P02463 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a1P02463 Gm44074-201ENSMUST00000204562 337 ntBASIC6.65□□□□□ -1.34
Col4a1P02463 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.65□□□□□ -1.34
Col4a1P02463 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.65□□□□□ -1.34
Col4a1P02463 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col4a1P02463 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col4a1P02463 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a1P02463 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.65□□□□□ -1.34
Col4a1P02463 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col4a1P02463 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms