Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm44768-201ENSMUST00000205719 393 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm45343-201ENSMUST00000210452 828 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm20786-201ENSMUST00000212649 436 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Lima1Q9ERG0 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Lima1Q9ERG0 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Lima1Q9ERG0 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
Lima1Q9ERG0 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Lima1Q9ERG0 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Lima1Q9ERG0 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm13214-201ENSMUST00000122137 408 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm23115-201ENSMUST00000158480 108 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm23149-201ENSMUST00000158837 230 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm9294-201ENSMUST00000165198 789 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm10087-201ENSMUST00000167650 330 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm42961-201ENSMUST00000202023 181 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm45850-201ENSMUST00000212536 338 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Olfr519-201ENSMUST00000084752 960 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Lima1Q9ERG0 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm15660-201ENSMUST00000118997 478 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm22867-201ENSMUST00000157499 109 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm9597-201ENSMUST00000171913 602 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm2058-201ENSMUST00000178791 560 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm7745-201ENSMUST00000182235 973 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Mir6952-201ENSMUST00000185092 61 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm5734-201ENSMUST00000189787 913 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Gm19921-201ENSMUST00000210505 703 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.45□□□□□ -1.54
Lima1Q9ERG0 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms