Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Mir546-201ENSMUST00000102105 121 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm11737-201ENSMUST00000118713 468 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm23669-201ENSMUST00000157470 128 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm3076-201ENSMUST00000161613 451 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Mir3095-201ENSMUST00000175552 87 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm6055-201ENSMUST00000180532 378 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm27887-201ENSMUST00000184367 102 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm3605-201ENSMUST00000185858 440 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm37336-202ENSMUST00000193705 468 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm45750-201ENSMUST00000211966 354 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm32526-201ENSMUST00000221878 981 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rpa3Q9CQ71 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm11826-201ENSMUST00000118781 438 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm14620-201ENSMUST00000120656 383 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm25152-201ENSMUST00000157117 114 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm23030-201ENSMUST00000158004 273 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm22160-201ENSMUST00000158405 328 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm6223-201ENSMUST00000178436 871 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm28195-201ENSMUST00000186992 372 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm38015-201ENSMUST00000193048 188 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm8826-201ENSMUST00000193161 948 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Mir219c-201ENSMUST00000199860 60 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm34149-201ENSMUST00000203547 304 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm18255-201ENSMUST00000211316 765 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm19174-201ENSMUST00000216944 956 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm18247-201ENSMUST00000222937 601 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rpa3Q9CQ71 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.84□□□□□ -1.48
Rpa3Q9CQ71 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Rpa3Q9CQ71 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Rpa3Q9CQ71 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms