Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm5324-201ENSMUST00000208115 476 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm7045-201ENSMUST00000221466 605 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 AC122393.1-201ENSMUST00000226570 319 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm24695-201ENSMUST00000083877 83 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Cmah-208ENSMUST00000224819 9482 ntBASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nkx6-1Q99MA9 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Nkx6-1Q99MA9 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm25346-201ENSMUST00000104509 128 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm15149-201ENSMUST00000119370 360 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm12630-201ENSMUST00000121575 784 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm15141-201ENSMUST00000121860 729 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Mir1932-201ENSMUST00000157390 90 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Mir1960-201ENSMUST00000157488 78 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm27512-201ENSMUST00000175328 126 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm11392-201ENSMUST00000181419 710 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm27960-201ENSMUST00000183445 184 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm27849-201ENSMUST00000183673 125 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm37710-201ENSMUST00000193501 1274 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm43392-201ENSMUST00000196560 434 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm43945-201ENSMUST00000203595 754 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm31861-201ENSMUST00000204563 672 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Gm44288-201ENSMUST00000205061 2795 ntBASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nkx6-1Q99MA9 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms