Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm23750-201ENSMUST00000104222 132 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm13193-201ENSMUST00000117275 225 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm8595-201ENSMUST00000118250 630 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm24685-201ENSMUST00000157764 285 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm23546-201ENSMUST00000158211 137 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Mir6417-201ENSMUST00000183815 116 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Mir7687-201ENSMUST00000184722 59 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm29551-201ENSMUST00000190913 698 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm43516-201ENSMUST00000196891 322 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Clec2j-201ENSMUST00000032517 515 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Mir27a-201ENSMUST00000083510 87 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.03□□□□□ -1.6
Scrt1Q99M85 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Scrt1Q99M85 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm14871-201ENSMUST00000119056 194 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm25534-201ENSMUST00000175365 125 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm27855-201ENSMUST00000184122 128 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm28385-201ENSMUST00000185671 292 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm28976-201ENSMUST00000188070 144 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm19124-201ENSMUST00000191041 832 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm18036-201ENSMUST00000195256 272 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm44456-201ENSMUST00000196554 89 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Gm32158-201ENSMUST00000200135 404 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.02□□□□□ -1.61
Scrt1Q99M85 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Scrt1Q99M85 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Scrt1Q99M85 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms