Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm5405-201ENSMUST00000120478 609 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm12890-201ENSMUST00000120885 373 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm15596-201ENSMUST00000121139 784 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm26069-201ENSMUST00000157497 277 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm37463-201ENSMUST00000193819 796 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm43762-201ENSMUST00000201521 295 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm42961-201ENSMUST00000202023 181 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm7990-201ENSMUST00000212126 593 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm36262-201ENSMUST00000223274 499 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm7887-201ENSMUST00000056948 537 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdk5rap3Q99LM2 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm12653-201ENSMUST00000117778 561 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm14876-201ENSMUST00000120795 327 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm12494-201ENSMUST00000121684 521 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm24179-201ENSMUST00000158925 127 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm16164-201ENSMUST00000160078 468 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm27998-201ENSMUST00000184902 361 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm37719-201ENSMUST00000194615 292 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm43946-201ENSMUST00000204058 886 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm20786-201ENSMUST00000212649 436 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.86□□□□□ -1.47
Cdk5rap3Q99LM2 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdk5rap3Q99LM2 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms