Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm16073-201ENSMUST00000116032 517 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm12842-201ENSMUST00000117298 476 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm23888-201ENSMUST00000122690 253 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm20454-201ENSMUST00000172713 221 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm27820-201ENSMUST00000183628 175 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm29011-201ENSMUST00000191059 712 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm2147-201ENSMUST00000193588 639 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm42643-201ENSMUST00000200504 279 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm44261-201ENSMUST00000203337 209 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm8479-201ENSMUST00000203825 718 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm44580-201ENSMUST00000206333 877 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm7439-201ENSMUST00000214053 835 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm4556-201ENSMUST00000217808 355 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 CT025525.2-201ENSMUST00000227743 423 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ccdc9Q8VC31 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Ccdc9Q8VC31 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Ccdc9Q8VC31 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 AC154227.1-201ENSMUST00000228809 2467 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Mir680-3-201ENSMUST00000102298 87 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm25093-201ENSMUST00000103993 132 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm11893-201ENSMUST00000117829 491 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm14610-201ENSMUST00000118358 966 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm13626-201ENSMUST00000119435 402 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm12731-201ENSMUST00000120932 268 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm12399-201ENSMUST00000121475 446 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm12540-201ENSMUST00000121938 319 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm25675-201ENSMUST00000174979 118 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm37758-201ENSMUST00000194275 629 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm46364-201ENSMUST00000218548 319 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Gm37205-201ENSMUST00000194820 2736 ntBASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ccdc9Q8VC31 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm24790-201ENSMUST00000104285 132 ntBASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm8855-201ENSMUST00000118888 878 ntBASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm8312-201ENSMUST00000119380 618 ntBASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm14301-201ENSMUST00000120181 324 ntBASIC6.82□□□□□ -1.32
Ccdc9Q8VC31 Gm11504-201ENSMUST00000120211 173 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms