Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Vps39Q8R5L3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps39Q8R5L3 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps39Q8R5L3 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps39Q8R5L3 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Vps39Q8R5L3 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm5405-201ENSMUST00000120478 609 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm15618-201ENSMUST00000121610 452 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm27512-201ENSMUST00000175328 126 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm7745-201ENSMUST00000182235 973 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm37430-201ENSMUST00000193039 196 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm37375-201ENSMUST00000193859 387 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm37385-201ENSMUST00000195223 387 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm43148-201ENSMUST00000198237 520 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm43798-201ENSMUST00000202056 394 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm43974-201ENSMUST00000205080 684 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm44277-201ENSMUST00000205128 649 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm44607-201ENSMUST00000205611 1090 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.67□□□□□ -1.5
Vps39Q8R5L3 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps39Q8R5L3 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm24434-201ENSMUST00000104081 132 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm25917-201ENSMUST00000104267 130 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm13578-201ENSMUST00000120849 590 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm23903-201ENSMUST00000157566 131 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm26170-201ENSMUST00000158419 148 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm23149-201ENSMUST00000158837 230 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Scarna10-201ENSMUST00000158992 325 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm16164-201ENSMUST00000160078 468 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm3715-201ENSMUST00000172308 617 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm18802-201ENSMUST00000186270 888 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm19087-201ENSMUST00000191430 946 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm2142-201ENSMUST00000197899 589 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm45850-201ENSMUST00000212536 338 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm18329-201ENSMUST00000215832 589 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm23795-201ENSMUST00000084006 137 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.66□□□□□ -1.5
Vps39Q8R5L3 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms