Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm11510-201ENSMUST00000120278 347 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm15335-201ENSMUST00000122442 411 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm26254-201ENSMUST00000122491 118 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm29492-201ENSMUST00000187124 457 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm43895-201ENSMUST00000203219 855 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm5735-201ENSMUST00000207053 167 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Platr25-208ENSMUST00000222602 939 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.97□□□□□ -1.29
Brf1Q8CFK2 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Brf1Q8CFK2 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Brf1Q8CFK2 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Brf1Q8CFK2 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Brf1Q8CFK2 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.29
Brf1Q8CFK2 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.96□□□□□ -1.29
Brf1Q8CFK2 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.29
Brf1Q8CFK2 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm9427-201ENSMUST00000116187 651 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm16423-201ENSMUST00000120078 947 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm15331-201ENSMUST00000120225 385 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm3757-201ENSMUST00000125878 675 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm24465-201ENSMUST00000178398 107 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm43774-201ENSMUST00000196327 878 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm29815-201ENSMUST00000202418 178 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm2040-201ENSMUST00000202979 289 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm6104-201ENSMUST00000078030 603 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm23686-201ENSMUST00000083241 164 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Brf1Q8CFK2 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Brf1Q8CFK2 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms