Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm24465-201ENSMUST00000178398 107 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm38181-201ENSMUST00000181357 720 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm1972-201ENSMUST00000181606 964 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Mir6992-201ENSMUST00000183342 109 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm3605-201ENSMUST00000185858 440 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm37700-201ENSMUST00000192617 965 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm38122-201ENSMUST00000192679 885 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm37336-202ENSMUST00000193705 468 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm38360-201ENSMUST00000195130 454 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm44382-201ENSMUST00000198683 122 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm7802-201ENSMUST00000216464 262 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Snord59a-201ENSMUST00000082844 74 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Mir412-201ENSMUST00000083636 80 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lrif1Q8CDD9 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm15959-201ENSMUST00000121724 368 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm14970-201ENSMUST00000122289 355 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm9428-201ENSMUST00000127214 769 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm22636-201ENSMUST00000158142 275 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm23050-201ENSMUST00000158775 165 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm26057-201ENSMUST00000178099 165 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm36939-201ENSMUST00000194889 439 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm3912-203ENSMUST00000211024 367 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm7887-201ENSMUST00000056948 537 ntBASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Lrif1Q8CDD9 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Gm24719-201ENSMUST00000157520 110 ntBASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Gm24741-201ENSMUST00000158857 106 ntBASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Gm8185-201ENSMUST00000160999 669 ntBASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Gm6872-201ENSMUST00000165001 700 ntBASIC5.52□□□□□ -1.53
Lrif1Q8CDD9 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms