Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm13991-201ENSMUST00000120190 648 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm11852-201ENSMUST00000120806 222 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm22492-201ENSMUST00000157192 297 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm22932-201ENSMUST00000175510 72 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm28466-201ENSMUST00000190678 659 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm38330-201ENSMUST00000192743 959 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm6074-201ENSMUST00000193340 451 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm43148-201ENSMUST00000198237 520 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm18205-201ENSMUST00000209215 841 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm45596-201ENSMUST00000209279 434 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm46191-201ENSMUST00000218899 433 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm6068-201ENSMUST00000222270 387 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Olfr467-201ENSMUST00000084756 927 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim9Q8C7M3 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm22374-201ENSMUST00000104583 132 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm11270-201ENSMUST00000117685 471 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm15421-202ENSMUST00000118224 399 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm25227-201ENSMUST00000158204 112 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm25439-201ENSMUST00000158280 131 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm22254-201ENSMUST00000179186 110 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm4832-201ENSMUST00000182679 399 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm27602-201ENSMUST00000183861 111 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm38201-201ENSMUST00000192143 387 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm44360-201ENSMUST00000200081 82 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm45259-201ENSMUST00000209217 1006 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim9Q8C7M3 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms