Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm16128-201ENSMUST00000117855 626 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm15754-201ENSMUST00000119191 478 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm21041-201ENSMUST00000214829 823 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm7887-201ENSMUST00000056948 537 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm22741-201ENSMUST00000083438 165 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.03□□□□□ -1.6
Col6a6Q8C6K9 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm24265-201ENSMUST00000101833 141 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm14352-201ENSMUST00000119250 449 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm15803-201ENSMUST00000120118 394 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm12732-201ENSMUST00000121688 180 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm24685-201ENSMUST00000157764 285 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm22122-201ENSMUST00000175147 200 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm24407-201ENSMUST00000177864 141 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm34224-201ENSMUST00000204606 364 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm44776-201ENSMUST00000207212 381 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Dennd6a-203ENSMUST00000224111 2692 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm5809-201ENSMUST00000121854 529 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm23513-201ENSMUST00000158181 133 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm33952-201ENSMUST00000197795 408 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a6Q8C6K9 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Gm21051-201ENSMUST00000221757 1688 ntBASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a6Q8C6K9 Gm14620-201ENSMUST00000120656 383 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms