Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Usp47Q8BY87 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm13887-201ENSMUST00000119009 344 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm14520-201ENSMUST00000119258 387 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm26086-201ENSMUST00000157902 263 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm29284-201ENSMUST00000188363 255 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm45700-201ENSMUST00000205866 347 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm7688-201ENSMUST00000212857 337 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 AC134537.2-201ENSMUST00000217770 575 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm18757-201ENSMUST00000207938 3141 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm20287-201ENSMUST00000172848 2367 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm18852-201ENSMUST00000184149 3593 ntBASIC7.84□□□□□ -1.15
Usp47Q8BY87 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Usp47Q8BY87 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm13363-201ENSMUST00000122008 522 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Mir3062-201ENSMUST00000174986 105 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Mir7087-201ENSMUST00000184840 70 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm28429-201ENSMUST00000188521 363 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm19739-201ENSMUST00000195941 153 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm45628-201ENSMUST00000210849 274 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm2961-201ENSMUST00000211074 772 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 AC154851.1-201ENSMUST00000221591 655 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 CT485612.1-201ENSMUST00000222555 382 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 AC129085.4-201ENSMUST00000224536 570 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 AV026068-231ENSMUST00000225862 482 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
Usp47Q8BY87 Gm37769-201ENSMUST00000193753 2369 ntBASIC7.84□□□□□ -1.16
Usp47Q8BY87 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 AC158779.2-201ENSMUST00000227902 1947 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp47Q8BY87 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm23294-201ENSMUST00000104150 164 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Lipe-203ENSMUST00000105177 1251 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm11197-201ENSMUST00000145158 839 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm7335-201ENSMUST00000172475 373 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm23806-201ENSMUST00000175157 109 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm44683-201ENSMUST00000209088 484 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 AC156950.1-201ENSMUST00000219604 456 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 AC162467.1-201ENSMUST00000220254 621 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm23511-201ENSMUST00000083084 164 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm9386-201ENSMUST00000095195 381 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Usp47Q8BY87 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.83□□□□□ -1.16
Usp47Q8BY87 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp47Q8BY87 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm37101-201ENSMUST00000191656 3660 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm23750-201ENSMUST00000104222 132 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm11911-201ENSMUST00000117938 1023 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms