Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nup98Q6PFD9 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nup98Q6PFD9 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Nup98Q6PFD9 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Nup98Q6PFD9 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm24265-201ENSMUST00000101833 141 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 H3f3c-201ENSMUST00000119459 411 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm13738-201ENSMUST00000122437 469 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm22122-201ENSMUST00000175147 200 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm24407-201ENSMUST00000177864 141 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Mir6516-201ENSMUST00000196236 110 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm42814-201ENSMUST00000199370 460 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm44048-201ENSMUST00000204531 361 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm2099-201ENSMUST00000220979 412 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm18247-201ENSMUST00000222937 601 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm11561-201ENSMUST00000117429 417 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm10319-202ENSMUST00000159439 846 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm17981-201ENSMUST00000191109 739 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.48□□□□□ -1.37
Nup98Q6PFD9 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm23700-201ENSMUST00000158842 102 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm6223-201ENSMUST00000178436 871 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm44134-202ENSMUST00000204777 545 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm44776-201ENSMUST00000207212 381 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm18904-201ENSMUST00000218756 329 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm25139-201ENSMUST00000083247 210 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.47□□□□□ -1.37
Nup98Q6PFD9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Nup98Q6PFD9 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Nup98Q6PFD9 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms