Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm15279-201ENSMUST00000155593 288 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm24957-201ENSMUST00000179604 132 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm42919-201ENSMUST00000197753 1284 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Snora44-201ENSMUST00000082670 129 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr1160-201ENSMUST00000099839 960 ntBASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Usp49Q6P9L4 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm24142-201ENSMUST00000101960 107 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm8424-201ENSMUST00000117716 988 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm15971-201ENSMUST00000119372 211 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm13363-201ENSMUST00000122008 522 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm22492-201ENSMUST00000157192 297 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm26069-201ENSMUST00000157497 277 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm22916-201ENSMUST00000157616 119 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm24692-201ENSMUST00000157761 146 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm23082-201ENSMUST00000157852 133 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm16571-201ENSMUST00000159112 291 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm7281-201ENSMUST00000160010 543 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm18343-201ENSMUST00000172802 604 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm29745-201ENSMUST00000198005 687 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm7990-201ENSMUST00000212126 593 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Mir143-201ENSMUST00000083511 63 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Robo2-210ENSMUST00000226478 8059 ntBASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp49Q6P9L4 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp49Q6P9L4 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.37□□□□□ -1.39
Usp49Q6P9L4 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms