Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm3757-201ENSMUST00000125878 675 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm37637-201ENSMUST00000195540 1256 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm43308-201ENSMUST00000197236 373 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 AC131720.2-201ENSMUST00000220420 431 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm22444-201ENSMUST00000093693 108 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm43618-201ENSMUST00000197392 3451 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Gm44916-201ENSMUST00000208664 2194 ntBASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim41Q5NCC3 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm15575-201ENSMUST00000119414 1581 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Mir674-201ENSMUST00000102421 100 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Snord88a-201ENSMUST00000116723 90 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm11553-201ENSMUST00000120682 240 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm23024-201ENSMUST00000158770 292 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm7952-201ENSMUST00000180540 984 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm37475-201ENSMUST00000193107 1015 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm45857-201ENSMUST00000212207 356 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 AC102575.1-201ENSMUST00000225348 547 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 AC133203.2-201ENSMUST00000226709 464 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 AC117608.1-201ENSMUST00000225500 3418 ntBASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim41Q5NCC3 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm38277-201ENSMUST00000195172 1367 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm26289-201ENSMUST00000104169 131 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm16216-201ENSMUST00000118970 1111 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm14202-201ENSMUST00000120121 311 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm13642-201ENSMUST00000121697 381 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Sms-ps-201ENSMUST00000121773 1101 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm16259-201ENSMUST00000145241 553 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm2950-201ENSMUST00000185530 520 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm3454-201ENSMUST00000185571 412 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm43559-201ENSMUST00000198755 466 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm45032-201ENSMUST00000205375 520 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 AC154640.1-202ENSMUST00000227828 496 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm23097-201ENSMUST00000083448 105 ntBASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim41Q5NCC3 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms