Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trafd1Q3UDK1 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm13489-201ENSMUST00000121234 971 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm15335-201ENSMUST00000122442 411 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm5401-201ENSMUST00000122444 365 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm9006-201ENSMUST00000165520 841 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm6472-201ENSMUST00000178147 651 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Mir7008-201ENSMUST00000184398 63 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Mir6412-201ENSMUST00000184477 97 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm27148-201ENSMUST00000185086 160 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm37375-201ENSMUST00000193859 387 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm37385-201ENSMUST00000195223 387 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm43798-201ENSMUST00000202056 394 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm7808-201ENSMUST00000082002 387 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.58□□□□□ -1.52
Trafd1Q3UDK1 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm14539-201ENSMUST00000117527 174 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm11774-201ENSMUST00000118601 293 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm6427-201ENSMUST00000118721 979 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm8761-201ENSMUST00000121507 955 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm7309-201ENSMUST00000121670 581 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm22492-201ENSMUST00000157192 297 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm24477-201ENSMUST00000157438 103 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm3715-201ENSMUST00000172308 617 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm22932-201ENSMUST00000175510 72 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm1972-201ENSMUST00000181606 964 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm38131-201ENSMUST00000192449 430 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm44463-201ENSMUST00000198895 137 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Mir6906-201ENSMUST00000198998 58 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Trafd1Q3UDK1 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Trafd1Q3UDK1 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms