Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.3□□□□□ -1.4
Msx2Q03358 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 AC154806.3-201ENSMUST00000227376 439 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Msx2Q03358 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 AW822073-201ENSMUST00000075305 555 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Msx2Q03358 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Msx2Q03358 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Msx2Q03358 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Msx2Q03358 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.3□□□□□ -1.4
Msx2Q03358 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Msx2Q03358 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Msx2Q03358 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msx2Q03358 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Msx2Q03358 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm26016-201ENSMUST00000104403 129 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm14865-201ENSMUST00000117523 494 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm11926-201ENSMUST00000118520 430 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm6142-201ENSMUST00000120290 325 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm14725-201ENSMUST00000120324 828 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.29□□□□□ -1.4
Msx2Q03358 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm9697-201ENSMUST00000147052 997 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm24647-201ENSMUST00000157112 113 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm22820-201ENSMUST00000157205 329 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.29□□□□□ -1.4
Msx2Q03358 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm7346-201ENSMUST00000169661 476 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm20543-201ENSMUST00000174200 726 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Mir1264-201ENSMUST00000175381 86 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm20612-201ENSMUST00000176318 236 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm5252-201ENSMUST00000189030 909 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm5575-201ENSMUST00000190879 398 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm35323-201ENSMUST00000191836 499 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm37869-201ENSMUST00000193385 595 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm37889-201ENSMUST00000194174 251 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm8861-201ENSMUST00000196346 832 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm43147-201ENSMUST00000196944 542 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Trav3-2-201ENSMUST00000198999 305 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm8189-203ENSMUST00000211159 1225 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.29□□□□□ -1.4
Msx2Q03358 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.29□□□□□ -1.4
Msx2Q03358 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Gm35619-201ENSMUST00000222548 600 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 AC165146.1-201ENSMUST00000223777 900 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 AC158521.1-201ENSMUST00000225295 660 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msx2Q03358 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Gm9762-201ENSMUST00000036976 444 ntBASIC6.29□□□□□ -1.4
Msx2Q03358 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msx2Q03358 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msx2Q03358 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms