Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm8604-201ENSMUST00000183150 965 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Mir7006-201ENSMUST00000183624 69 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Mir6417-201ENSMUST00000183815 116 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm27193-201ENSMUST00000184217 586 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm29813-201ENSMUST00000195856 447 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm43973-201ENSMUST00000203562 210 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm4587-201ENSMUST00000209135 637 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm11360-201ENSMUST00000221898 262 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm18940-201ENSMUST00000222518 871 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 CT030195.1-201ENSMUST00000223887 378 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 CT030238.4-203ENSMUST00000227343 836 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 AC118250.1-201ENSMUST00000228569 875 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Gm43162-201ENSMUST00000198292 1770 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 AC121997.2-201ENSMUST00000228095 2294 ntBASIC4.93□□□□□ -1.62
Nkx3-1P97436 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nkx3-1P97436 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm37775-201ENSMUST00000194120 2313 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 AC115289.2-201ENSMUST00000223836 2803 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm37132-201ENSMUST00000195553 2238 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Fam35a-206ENSMUST00000228626 3100 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm25758-201ENSMUST00000103987 129 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm13579-201ENSMUST00000118519 517 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm11197-201ENSMUST00000145158 839 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm8185-201ENSMUST00000160999 669 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm3216-201ENSMUST00000166927 486 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm3141-201ENSMUST00000168726 499 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm8321-201ENSMUST00000181691 980 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm28429-201ENSMUST00000188521 363 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm29755-201ENSMUST00000196976 948 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm36378-201ENSMUST00000201709 388 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm18007-201ENSMUST00000205019 844 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm19169-201ENSMUST00000220109 1246 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC4.92□□□□□ -1.62
Nkx3-1P97436 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nkx3-1P97436 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms