Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.14□□□□□ -1.43
NcanP55066 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.14□□□□□ -1.43
NcanP55066 Mir6400-201ENSMUST00000184870 92 ntBASIC6.14□□□□□ -1.43
NcanP55066 Gm29124-201ENSMUST00000186576 452 ntBASIC6.14□□□□□ -1.43
NcanP55066 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.14□□□□□ -1.43
NcanP55066 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.14□□□□□ -1.43
NcanP55066 Gm20056-201ENSMUST00000194813 519 ntBASIC6.14□□□□□ -1.43
NcanP55066 Gm18150-201ENSMUST00000195341 645 ntBASIC6.14□□□□□ -1.43
NcanP55066 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.14□□□□□ -1.43
NcanP55066 Gm4321-201ENSMUST00000200520 442 ntBASIC6.14□□□□□ -1.43
NcanP55066 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
NcanP55066 Gm8290-201ENSMUST00000218202 477 ntBASIC6.14□□□□□ -1.43
NcanP55066 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NcanP55066 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.14□□□□□ -1.43
NcanP55066 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.14□□□□□ -1.43
NcanP55066 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.14□□□□□ -1.43
NcanP55066 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NcanP55066 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.14□□□□□ -1.43
NcanP55066 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.14□□□□□ -1.43
NcanP55066 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
NcanP55066 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.14□□□□□ -1.43
NcanP55066 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.14□□□□□ -1.43
NcanP55066 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.13□□□□□ -1.43
NcanP55066 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NcanP55066 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.13□□□□□ -1.43
NcanP55066 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NcanP55066 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.13□□□□□ -1.43
NcanP55066 Gm12115-201ENSMUST00000119969 447 ntBASIC6.13□□□□□ -1.43
NcanP55066 Gm11825-201ENSMUST00000120710 736 ntBASIC6.13□□□□□ -1.43
NcanP55066 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC6.13□□□□□ -1.43
NcanP55066 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Gm37838-201ENSMUST00000194464 312 ntBASIC6.13□□□□□ -1.43
NcanP55066 Gm33952-201ENSMUST00000197795 408 ntBASIC6.13□□□□□ -1.43
NcanP55066 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.13□□□□□ -1.43
NcanP55066 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NcanP55066 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.13□□□□□ -1.43
NcanP55066 Gm22826-201ENSMUST00000083774 165 ntBASIC6.13□□□□□ -1.43
NcanP55066 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.13□□□□□ -1.43
NcanP55066 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.13□□□□□ -1.43
NcanP55066 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
NcanP55066 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NcanP55066 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.13□□□□□ -1.43
NcanP55066 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NcanP55066 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NcanP55066 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.12□□□□□ -1.43
NcanP55066 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
NcanP55066 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.12□□□□□ -1.43
NcanP55066 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC6.12□□□□□ -1.43
NcanP55066 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NcanP55066 Gm11826-201ENSMUST00000118781 438 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm7363-201ENSMUST00000119883 399 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm15803-201ENSMUST00000120118 394 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm14845-201ENSMUST00000121259 306 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm12267-201ENSMUST00000121609 761 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm14212-201ENSMUST00000122023 826 ntBASIC6.12□□□□□ -1.43
NcanP55066 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.12□□□□□ -1.43
NcanP55066 Gm25389-201ENSMUST00000157340 286 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms