Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC8.54□□□□□ -1.04
Cux1P53564 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Gm44259-201ENSMUST00000204996 298 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC8.54□□□□□ -1.04
Cux1P53564 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC8.54□□□□□ -1.04
Cux1P53564 AC133203.2-201ENSMUST00000226709 464 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Cux1P53564 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cux1P53564 Gm43611-201ENSMUST00000196656 4352 ntBASIC8.54□□□□□ -1.04
Cux1P53564 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cux1P53564 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.53□□□□□ -1.04
Cux1P53564 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.53□□□□□ -1.04
Cux1P53564 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cux1P53564 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Cux1P53564 n-R5s174-201ENSMUST00000122638 121 ntBASIC8.53□□□□□ -1.04
Cux1P53564 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC8.53□□□□□ -1.04
Cux1P53564 Gm23327-201ENSMUST00000157420 78 ntBASIC8.53□□□□□ -1.04
Cux1P53564 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cux1P53564 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC8.53□□□□□ -1.04
Cux1P53564 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC8.53□□□□□ -1.04
Cux1P53564 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Cux1P53564 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cux1P53564 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cux1P53564 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Cux1P53564 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Cux1P53564 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Cux1P53564 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cux1P53564 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Gm15560-201ENSMUST00000117107 643 ntBASIC8.52□□□□□ -1.05
Cux1P53564 Gm11366-201ENSMUST00000119279 429 ntBASIC8.52□□□□□ -1.05
Cux1P53564 Gm15480-201ENSMUST00000120442 519 ntBASIC8.52□□□□□ -1.05
Cux1P53564 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC8.52□□□□□ -1.05
Cux1P53564 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cux1P53564 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cux1P53564 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cux1P53564 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC8.52□□□□□ -1.05
Cux1P53564 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC8.52□□□□□ -1.05
Cux1P53564 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC8.52□□□□□ -1.05
Cux1P53564 Gm42452-201ENSMUST00000199749 617 ntBASIC8.52□□□□□ -1.05
Cux1P53564 Gm45422-201ENSMUST00000211476 246 ntBASIC8.52□□□□□ -1.05
Cux1P53564 Gm40598-201ENSMUST00000222953 547 ntBASIC8.52□□□□□ -1.05
Cux1P53564 AC096628.1-201ENSMUST00000226060 641 ntBASIC8.52□□□□□ -1.05
Cux1P53564 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cux1P53564 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cux1P53564 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cux1P53564 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cux1P53564 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cux1P53564 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cux1P53564 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cux1P53564 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.52□□□□□ -1.05
Cux1P53564 AC154642.2-201ENSMUST00000223657 2485 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Cux1P53564 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Cux1P53564 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Cux1P53564 Gm38372-201ENSMUST00000194854 4028 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Cux1P53564 Gm26376-201ENSMUST00000104784 110 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Gm6081-201ENSMUST00000134472 489 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Gm43408-201ENSMUST00000198263 440 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Gm7333-201ENSMUST00000213449 1060 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Fam35a-206ENSMUST00000228626 3100 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Cux1P53564 AC121942.1-201ENSMUST00000224459 2891 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 AC130661.1-201ENSMUST00000218248 1680 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.51□□□□□ -1.05
Cux1P53564 Cmah-208ENSMUST00000224819 9482 ntBASIC8.51□□□□□ -1.05
Cux1P53564 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cux1P53564 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC8.51□□□□□ -1.05
Cux1P53564 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Cux1P53564 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC8.5□□□□□ -1.05
Cux1P53564 Gm29293-201ENSMUST00000189416 2188 ntBASIC8.5□□□□□ -1.05
Cux1P53564 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Gm16128-201ENSMUST00000117855 626 ntBASIC8.5□□□□□ -1.05
Cux1P53564 Gm14125-202ENSMUST00000120921 756 ntBASIC8.5□□□□□ -1.05
Cux1P53564 Mir7031-201ENSMUST00000183860 65 ntBASIC8.5□□□□□ -1.05
Cux1P53564 Gm34176-201ENSMUST00000192621 474 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms