Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Brca1P48754 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Brca1P48754 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Brca1P48754 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Brca1P48754 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.31□□□□□ -1.4
Brca1P48754 Gm11912-201ENSMUST00000117235 264 ntBASIC6.31□□□□□ -1.4
Brca1P48754 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.31□□□□□ -1.4
Brca1P48754 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Brca1P48754 Gm26098-201ENSMUST00000157247 288 ntBASIC6.31□□□□□ -1.4
Brca1P48754 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.31□□□□□ -1.4
Brca1P48754 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Mir409-201ENSMUST00000198153 79 ntBASIC6.31□□□□□ -1.4
Brca1P48754 Gm45228-201ENSMUST00000206585 352 ntBASIC6.31□□□□□ -1.4
Brca1P48754 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.31□□□□□ -1.4
Brca1P48754 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.31□□□□□ -1.4
Brca1P48754 Gm23626-201ENSMUST00000082458 133 ntBASIC6.31□□□□□ -1.4
Brca1P48754 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Brca1P48754 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.31□□□□□ -1.4
Brca1P48754 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Brca1P48754 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.31□□□□□ -1.4
Brca1P48754 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Brca1P48754 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Brca1P48754 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Brca1P48754 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Brca1P48754 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Brca1P48754 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
Brca1P48754 Gm4011-201ENSMUST00000174657 2555 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Brca1P48754 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Brca1P48754 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Brca1P48754 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.3□□□□□ -1.4
Brca1P48754 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm23883-201ENSMUST00000122686 290 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.3□□□□□ -1.4
Brca1P48754 Gm5372-201ENSMUST00000187540 409 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Trbv9-201ENSMUST00000194494 290 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm4290-201ENSMUST00000206897 814 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm19880-201ENSMUST00000207731 318 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm18924-201ENSMUST00000211929 316 ntBASIC6.3□□□□□ -1.4
Brca1P48754 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.3□□□□□ -1.4
Brca1P48754 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.3□□□□□ -1.4
Brca1P48754 Gm4822-201ENSMUST00000077551 479 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm23686-201ENSMUST00000083241 164 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Brca1P48754 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Brca1P48754 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm44235-201ENSMUST00000204312 3058 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Brca1P48754 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Brca1P48754 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Brca1P48754 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.3□□□□□ -1.4
Brca1P48754 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm24265-201ENSMUST00000101833 141 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm15803-201ENSMUST00000120118 394 ntBASIC6.29□□□□□ -1.4
Brca1P48754 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm26170-201ENSMUST00000158419 148 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm22122-201ENSMUST00000175147 200 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm24407-201ENSMUST00000177864 141 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm21735-201ENSMUST00000190360 696 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Gm43436-201ENSMUST00000199308 147 ntBASIC6.29□□□□□ -1.4
Brca1P48754 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Gm4714-201ENSMUST00000203395 279 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Brca1P48754 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.29□□□□□ -1.4
Brca1P48754 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.29□□□□□ -1.4
Brca1P48754 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.29□□□□□ -1.4
Brca1P48754 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms