Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx2P43241 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx2P43241 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdx2P43241 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Cdx2P43241 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx2P43241 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cdx2P43241 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cdx2P43241 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdx2P43241 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm26069-201ENSMUST00000157497 277 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm23537-201ENSMUST00000157536 330 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm22312-201ENSMUST00000158005 130 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm23546-201ENSMUST00000158211 137 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm3053-201ENSMUST00000161709 616 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm25019-201ENSMUST00000179732 110 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm27543-201ENSMUST00000183562 177 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm5334-201ENSMUST00000187472 720 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm28976-201ENSMUST00000188070 144 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm44048-201ENSMUST00000204531 361 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm19880-201ENSMUST00000207731 318 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm45660-201ENSMUST00000210267 151 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.42□□□□□ -1.54
Cdx2P43241 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdx2P43241 Mir31-201ENSMUST00000083474 106 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Cdx2P43241 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cdx2P43241 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx2P43241 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.42□□□□□ -1.54
Cdx2P43241 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cdx2P43241 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx2P43241 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm4234-201ENSMUST00000119747 714 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm12734-201ENSMUST00000120228 948 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm11805-201ENSMUST00000121238 600 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm25430-201ENSMUST00000157614 289 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm10319-202ENSMUST00000159439 846 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdx2P43241 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm43779-201ENSMUST00000196691 829 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.41□□□□□ -1.54
Cdx2P43241 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Gm8290-201ENSMUST00000218202 477 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx2P43241 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.41□□□□□ -1.54
Cdx2P43241 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Cdx2P43241 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Cdx2P43241 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdx2P43241 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdx2P43241 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdx2P43241 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx2P43241 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms