Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm26069-201ENSMUST00000157497 277 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm26993-201ENSMUST00000182766 789 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm28929-201ENSMUST00000185330 1193 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm28080-201ENSMUST00000188552 722 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm28455-201ENSMUST00000189105 1290 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm21524-201ENSMUST00000190499 696 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm18183-201ENSMUST00000191024 615 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm21715-201ENSMUST00000191056 694 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm44940-201ENSMUST00000206225 1247 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm18600-201ENSMUST00000207205 505 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm21112-201ENSMUST00000212224 578 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm7760-201ENSMUST00000212265 578 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm7807-201ENSMUST00000212475 578 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Gm5831-201ENSMUST00000216016 1209 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm18103-201ENSMUST00000216621 779 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm4510-201ENSMUST00000218265 427 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Gm2398-201ENSMUST00000218347 883 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 CT009711.2-201ENSMUST00000225352 934 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.51□□□□□ -1.69
Sdc1P18828 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Sdc1P18828 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Sdc1P18828 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Sdc1P18828 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sdc1P18828 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm14201-201ENSMUST00000117627 289 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm8644-201ENSMUST00000118619 596 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm5793-201ENSMUST00000119393 630 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm13444-201ENSMUST00000119445 522 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm11866-201ENSMUST00000120209 335 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm13998-201ENSMUST00000120952 335 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm12413-201ENSMUST00000121508 312 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm25290-201ENSMUST00000122796 144 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm25826-201ENSMUST00000157090 137 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm17198-201ENSMUST00000171792 1154 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Mir5617-201ENSMUST00000176786 57 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Sdc1P18828 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm9556-201ENSMUST00000182938 940 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm43044-201ENSMUST00000198091 379 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC4.5□□□□□ -1.69
Sdc1P18828 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm7990-201ENSMUST00000212126 593 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm6885-201ENSMUST00000217261 372 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 AC079644.2-201ENSMUST00000220581 322 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sdc1P18828 AC122459.2-201ENSMUST00000227099 638 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.5□□□□□ -1.69
Sdc1P18828 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Sdc1P18828 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Sdc1P18828 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Sdc1P18828 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Sdc1P18828 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Sdc1P18828 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms